TY - JOUR
T1 - Structure of the newly found green turtle egg-white ribonuclease
AU - Katekaew, Somporn
AU - Kuaprasert, Buabarn
AU - Torikata, Takao
AU - Kakuta, Yoshimitsu
AU - Kimura, Makoto
AU - Yoneda, Kazunari
AU - Araki, Tomohiro
PY - 2010
Y1 - 2010
N2 - Marine green turtle (Chelonia mydas) egg-white ribonuclease (GTRNase) was crystallized from 1.1 M ammonium sulfate pH 5.5 and 30% glycerol using the sitting-drop vapour-diffusion method. The structure of GTRNase has been solved at 1.60 Å resolution by the molecular-replacement technique using a model based on the structure of RNase 5 (murine angiogenin) from Mus musculus (46% identity). The crystal belonged to the monoclinic space group C2, with unit-cell parameters a = 86.271, b = 34.174, c = 39.738 Å, = 90, Β = 102, γ = 90°. GTRNase consists of three helices and seven Β-strands and displays the +Β folding topology typical of a member of the RNase A superfamily. Superposition of the C- coordinates of GTRNase and RNase A superfamily members indicates that the overall structure is highly similar to that of angiogenin or RNase 5 from M. musculus (PDB code 2bwl) and RNase A from Bos taurus (PDB code 2blz), with root-mean-square deviations of 3.9 and 2.0 Å, respectively. The catalytic residues are conserved with respect to the RNase A superfamily. The three disulfide bridges observed in the reptilian enzymes are conserved in GTRNase, while one further disulfide bond is required for the structural stability of mammalian RNases. GTRNase is expressed in egg white and the fact that its sequence has the highest similarity to that of snapping turtle pancreatic RNase suggests that the GTRNase secreted from oviduct cells to form egg white is probably the product of the same gene as activated in pancreatic cells.
AB - Marine green turtle (Chelonia mydas) egg-white ribonuclease (GTRNase) was crystallized from 1.1 M ammonium sulfate pH 5.5 and 30% glycerol using the sitting-drop vapour-diffusion method. The structure of GTRNase has been solved at 1.60 Å resolution by the molecular-replacement technique using a model based on the structure of RNase 5 (murine angiogenin) from Mus musculus (46% identity). The crystal belonged to the monoclinic space group C2, with unit-cell parameters a = 86.271, b = 34.174, c = 39.738 Å, = 90, Β = 102, γ = 90°. GTRNase consists of three helices and seven Β-strands and displays the +Β folding topology typical of a member of the RNase A superfamily. Superposition of the C- coordinates of GTRNase and RNase A superfamily members indicates that the overall structure is highly similar to that of angiogenin or RNase 5 from M. musculus (PDB code 2bwl) and RNase A from Bos taurus (PDB code 2blz), with root-mean-square deviations of 3.9 and 2.0 Å, respectively. The catalytic residues are conserved with respect to the RNase A superfamily. The three disulfide bridges observed in the reptilian enzymes are conserved in GTRNase, while one further disulfide bond is required for the structural stability of mammalian RNases. GTRNase is expressed in egg white and the fact that its sequence has the highest similarity to that of snapping turtle pancreatic RNase suggests that the GTRNase secreted from oviduct cells to form egg white is probably the product of the same gene as activated in pancreatic cells.
UR - http://www.scopus.com/inward/record.url?scp=77954440837&partnerID=8YFLogxK
UR - http://www.scopus.com/inward/citedby.url?scp=77954440837&partnerID=8YFLogxK
U2 - 10.1107/S1744309110016751
DO - 10.1107/S1744309110016751
M3 - Article
C2 - 20606267
AN - SCOPUS:77954440837
SN - 1744-3091
VL - 66
SP - 755
EP - 759
JO - Acta Crystallographica Section F: Structural Biology and Crystallization Communications
JF - Acta Crystallographica Section F: Structural Biology and Crystallization Communications
IS - 7
ER -