Performance Evaluation of Scheduling Schemes for a Genomic Application on OBIGrid

Yusuke Inoue; Takahiro Koita; Akira Fukuda

Performance Evaluation of Scheduling Schemes for a Genomic Application on OBIGrid

Yusuke Inoue, Takahiro Koita, Akira Fukuda

Advanced Software Engineering

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

1 Citation (Scopus)

Abstract

Heuristic scheduling schemes for the genomic application InterProScan are implemented, and these scheduling schemes are evaluated on OBIGrid (Open Bioinformatics Grid), which is an experimental Grid for bioinformatics being developed by Japan Committees. This paper presents the implementation details of the scheduling schemes and compares their mean response times. The mean response time of an Adaptive scheme, which uses the information of the application program and the processor, is smaller than that of other schemes for all load levels.

Original language	English
Title of host publication	Proceedings of the Second IASTED International Conference on Communications, Internet, and Information Technology
Editors	M.H. Hamza, M.H. Hamza
Pages	699-703
Number of pages	5
Publication status	Published - Dec 1 2003
Event	Proceedings of the Second IASTED International Conference on Communications, Internet, and Information Technology - Scottdale, AZ, United States Duration: Nov 17 2003 → Nov 19 2003

Publication series

Name	Proceedings of the Second IASTED International Conference on Communications, Internet, and Information Technology

Other

Other	Proceedings of the Second IASTED International Conference on Communications, Internet, and Information Technology
Country/Territory	United States
City	Scottdale, AZ
Period	11/17/03 → 11/19/03

All Science Journal Classification (ASJC) codes

Computer Networks and Communications

Cite this

Inoue, Y., Koita, T., & Fukuda, A. (2003). Performance Evaluation of Scheduling Schemes for a Genomic Application on OBIGrid. In M. H. Hamza, & M. H. Hamza (Eds.), Proceedings of the Second IASTED International Conference on Communications, Internet, and Information Technology (pp. 699-703). (Proceedings of the Second IASTED International Conference on Communications, Internet, and Information Technology).

Performance Evaluation of Scheduling Schemes for a Genomic Application on OBIGrid. / Inoue, Yusuke; Koita, Takahiro; Fukuda, Akira.
Proceedings of the Second IASTED International Conference on Communications, Internet, and Information Technology. ed. / M.H. Hamza; M.H. Hamza. 2003. p. 699-703 (Proceedings of the Second IASTED International Conference on Communications, Internet, and Information Technology).

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

Inoue, Y, Koita, T & Fukuda, A 2003, Performance Evaluation of Scheduling Schemes for a Genomic Application on OBIGrid. in MH Hamza & MH Hamza (eds), Proceedings of the Second IASTED International Conference on Communications, Internet, and Information Technology. Proceedings of the Second IASTED International Conference on Communications, Internet, and Information Technology, pp. 699-703, Proceedings of the Second IASTED International Conference on Communications, Internet, and Information Technology, Scottdale, AZ, United States, 11/17/03.

Inoue Y, Koita T, Fukuda A. Performance Evaluation of Scheduling Schemes for a Genomic Application on OBIGrid. In Hamza MH, Hamza MH, editors, Proceedings of the Second IASTED International Conference on Communications, Internet, and Information Technology. 2003. p. 699-703. (Proceedings of the Second IASTED International Conference on Communications, Internet, and Information Technology).

Inoue, Yusuke ; Koita, Takahiro ; Fukuda, Akira. / Performance Evaluation of Scheduling Schemes for a Genomic Application on OBIGrid. Proceedings of the Second IASTED International Conference on Communications, Internet, and Information Technology. editor / M.H. Hamza ; M.H. Hamza. 2003. pp. 699-703 (Proceedings of the Second IASTED International Conference on Communications, Internet, and Information Technology).

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Performance Evaluation of Scheduling Schemes for a Genomic Application on OBIGrid

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