TY - JOUR
T1 - JPOSTrepo
T2 - An international standard data repository for proteomes
AU - Okuda, Shujiro
AU - Watanabe, Yu
AU - Moriya, Yuki
AU - Kawano, Shin
AU - Yamamoto, Tadashi
AU - Matsumoto, Masaki
AU - Takami, Tomoyo
AU - Kobayashi, Daiki
AU - Araki, Norie
AU - Yoshizawa, Akiyasu C.
AU - Tabata, Tsuyoshi
AU - Sugiyama, Naoyuki
AU - Goto, Susumu
AU - Ishihama, Yasushi
N1 - Publisher Copyright:
© 2016 The Author(s).
PY - 2017/1/1
Y1 - 2017/1/1
N2 - Major advancements have recently been made in mass spectrometry-based proteomics, yielding an increasing number of datasets from various proteomics projects worldwide. In order to facilitate the sharing and reuse of promising datasets, it is important to construct appropriate, high-quality public data repositories. jPOSTrepo (https://repository. jpostdb.org/) has successfully implemented several unique features, including high-speed file uploading, flexible file management and easy-to-use interfaces. This repository has been launched as a public repository containing various proteomic datasets and is available for researchers worldwide. In addition, our repository has joined the ProteomeXchange consortium, which includes the most popular public repositories such as PRIDE in Europe for MS/MS datasets and PASSEL for SRM datasets in the USA. Later MassIVE was introduced in the USA and accepted into the ProteomeXchange, as was our repository in July 2016, providing important datasets from Asia/Oceania. Accordingly, this repository thus contributes to a global alliance to share and store all datasets from a wide variety of proteomics experiments. Thus, the repository is expected to become a major repository, particularly for data collected in the Asia/Oceania region.
AB - Major advancements have recently been made in mass spectrometry-based proteomics, yielding an increasing number of datasets from various proteomics projects worldwide. In order to facilitate the sharing and reuse of promising datasets, it is important to construct appropriate, high-quality public data repositories. jPOSTrepo (https://repository. jpostdb.org/) has successfully implemented several unique features, including high-speed file uploading, flexible file management and easy-to-use interfaces. This repository has been launched as a public repository containing various proteomic datasets and is available for researchers worldwide. In addition, our repository has joined the ProteomeXchange consortium, which includes the most popular public repositories such as PRIDE in Europe for MS/MS datasets and PASSEL for SRM datasets in the USA. Later MassIVE was introduced in the USA and accepted into the ProteomeXchange, as was our repository in July 2016, providing important datasets from Asia/Oceania. Accordingly, this repository thus contributes to a global alliance to share and store all datasets from a wide variety of proteomics experiments. Thus, the repository is expected to become a major repository, particularly for data collected in the Asia/Oceania region.
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U2 - 10.1093/nar/gkw1080
DO - 10.1093/nar/gkw1080
M3 - Article
C2 - 27899654
AN - SCOPUS:85016136273
SN - 0305-1048
VL - 45
SP - D1107-D1111
JO - Nucleic acids research
JF - Nucleic acids research
IS - D1
ER -