TY - JOUR
T1 - Cryo-EM Structure of the Prostaglandin E Receptor EP4 Coupled to G Protein
AU - Nojima, Shingo
AU - Fujita, Yoko
AU - Kimura, Kanako Terakado
AU - Nomura, Norimichi
AU - Suno, Ryoji
AU - Morimoto, Kazushi
AU - Yamamoto, Masaki
AU - Noda, Takeshi
AU - Iwata, So
AU - Shigematsu, Hideki
AU - Kobayashi, Takuya
N1 - Funding Information:
This study was supported by JSPS KAKENHI grant no. JP19J12880 (to S.N.), AMED Core Research for Evolutional Science and Technology (CREST) under grant no. JP20gm0910007 (to T.K.), AMED Science and Technology Platform Program for Advanced Biological Medicine under grant no. JP20am0401020 (to T.K.), AMED Research on Development of New Drugs under grant no. JP20ak0101103 (to T.K. M.Y. H.S. and S.I.), Takeda Science Foundation (to T.K.), the Naito Foundation (to T.K.), Koyanagi Foundation (to T.K.), Private University Research Branding Project (to T.K.), AMED Basis for Supporting Innovative Drug Discovery and Life Science Research (BINDS) under grant no. JP20am0101079 (to S.I.), an AMED Research Program on Emerging and Re-emerging Infectious Disease grants under grant no. 19fk0108113 and 20fk0108270h0001 (to T.N.), and JSPS Core-to-Core Program A (to T.N.). This work was also supported in part by the RIKEN Dynamic Structural Biology project (to M.Y. and H.S.). We thank Drs. A. Tsutsumi, M. Kikkawa (Cryo-EM facility in the University of Tokyo, Tokyo, Japan) for their help in cryo-EM data collection. The cryo-EM data collection of this work was partially supported by AMED BINDS under grant no. JP19am0101115 (support no. 2365). DNA sequencing analysis was performed at the Medical Research Support Center, Graduate School of Medicine, Kyoto University. The manuscript was proofread by Editage (https://www.editage.jp/). S.N. R.S. M.Y. T.N. S.I. H.S. and T.K. designed the project. S.N. R.S. and K.M. constructed the expression vector. S.N. expressed and purified the sample under the supervision of R.S. and N.N. and then Y.F. K.T.K. and H.S. prepared the sample grid, collected the cryo-EM images, and processed the EM data. S.N. built the 3D model. S.N. and K.M. designed and performed the GloSensor cAMP assay and analyzed the data. S.N. and Y.F. analyzed the data and compiled the figures for the manuscript. S.N. and H.S. wrote the manuscript. All authors discussed the results and commented on the manuscript. The authors declare no competing interests.
Funding Information:
This study was supported by JSPS KAKENHI grant no. JP19J12880 (to S.N.), AMED Core Research for Evolutional Science and Technology (CREST) under grant no. JP20gm0910007 (to T.K.), AMED Science and Technology Platform Program for Advanced Biological Medicine under grant no. JP20am0401020 (to T.K.), AMED Research on Development of New Drugs under grant no. JP20ak0101103 (to T.K., M.Y., H.S., and S.I.), Takeda Science Foundation (to T.K.), the Naito Foundation (to T.K.), Koyanagi Foundation (to T.K.), Private University Research Branding Project (to T.K.), AMED Basis for Supporting Innovative Drug Discovery and Life Science Research (BINDS) under grant no. JP20am0101079 (to S.I.), an AMED Research Program on Emerging and Re-emerging Infectious Disease grants under grant no. 19fk0108113 and 20fk0108270h0001 (to T.N.), and JSPS Core-to-Core Program A (to T.N.). This work was also supported in part by the RIKEN Dynamic Structural Biology project (to M.Y. and H.S.). We thank Drs. A. Tsutsumi, M. Kikkawa (Cryo-EM facility in the University of Tokyo, Tokyo, Japan) for their help in cryo-EM data collection. The cryo-EM data collection of this work was partially supported by AMED BINDS under grant no. JP19am0101115 (support no. 2365). DNA sequencing analysis was performed at the Medical Research Support Center, Graduate School of Medicine, Kyoto University. The manuscript was proofread by Editage ( https://www.editage.jp/ ).
Publisher Copyright:
© 2020 Elsevier Ltd
PY - 2021/3/4
Y1 - 2021/3/4
N2 - Prostaglandin E receptor EP4, a class A G protein-coupled receptor (GPCR), is a common drug target in various disorders, such as acute decompensated heart failure and ulcerative colitis. Here, we report the cryoelectron microscopy (cryo-EM) structure of the EP4-heterotrimeric G protein (Gs) complex with the endogenous ligand at a global resolution of 3.3 Å. In this structure, compared with that in the inactive EP4 structure, the sixth transmembrane domain is shifted outward on the intracellular side, although the shift is smaller than that in other class A GPCRs bound to Gs. Instead, the C-terminal helix of Gs is inserted toward TM2 of EP4, and the conserved C-terminal hook structure formsthe extended state. These structural features are formed by the conserved residues in prostanoid receptors (Phe542.39 and Trp3277.51). These findings may be important for the thorough understanding of the G protein-binding mechanism of EP4 and other prostanoid receptors. Nojima and Fujita et al. determined the cryo-EM structure of prostaglandin E receptor EP4 bound to the heterotrimeric G protein and the endogenous ligand PGE2. The structure reveals the novel binding mode between GPCRs and Gs, which provides us the information for the structure-based activation mechanism of prostanoid receptors.
AB - Prostaglandin E receptor EP4, a class A G protein-coupled receptor (GPCR), is a common drug target in various disorders, such as acute decompensated heart failure and ulcerative colitis. Here, we report the cryoelectron microscopy (cryo-EM) structure of the EP4-heterotrimeric G protein (Gs) complex with the endogenous ligand at a global resolution of 3.3 Å. In this structure, compared with that in the inactive EP4 structure, the sixth transmembrane domain is shifted outward on the intracellular side, although the shift is smaller than that in other class A GPCRs bound to Gs. Instead, the C-terminal helix of Gs is inserted toward TM2 of EP4, and the conserved C-terminal hook structure formsthe extended state. These structural features are formed by the conserved residues in prostanoid receptors (Phe542.39 and Trp3277.51). These findings may be important for the thorough understanding of the G protein-binding mechanism of EP4 and other prostanoid receptors. Nojima and Fujita et al. determined the cryo-EM structure of prostaglandin E receptor EP4 bound to the heterotrimeric G protein and the endogenous ligand PGE2. The structure reveals the novel binding mode between GPCRs and Gs, which provides us the information for the structure-based activation mechanism of prostanoid receptors.
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U2 - 10.1016/j.str.2020.11.007
DO - 10.1016/j.str.2020.11.007
M3 - Article
C2 - 33264604
AN - SCOPUS:85097875286
SN - 0969-2126
VL - 29
SP - 252-260.e6
JO - Structure
JF - Structure
IS - 3
ER -