TY - GEN
T1 - A method for analysis of simultaneous equations in cell models
AU - Shimayoshi, Takao
AU - Amano, Akira
AU - Matsuda, Tetsuya
PY - 2009
Y1 - 2009
N2 - Some models of cellular physiological functions are formulated as ordinary differential equations that contain multiple systems of simultaneous nonlinear equations. Simulation of such a model described in a declarative representation format requires determination of equations to be simultaneously solved with specification of independent and parameter variables in the model. In this report, a method for extracting systems of simultaneous equations in a cell model is presented. The present method analyzes a graph representation of a model and extracts the subgraphs that represent equation systems to be simultaneously solved, by efficiently interactive selection of independent variables of the model.
AB - Some models of cellular physiological functions are formulated as ordinary differential equations that contain multiple systems of simultaneous nonlinear equations. Simulation of such a model described in a declarative representation format requires determination of equations to be simultaneously solved with specification of independent and parameter variables in the model. In this report, a method for extracting systems of simultaneous equations in a cell model is presented. The present method analyzes a graph representation of a model and extracts the subgraphs that represent equation systems to be simultaneously solved, by efficiently interactive selection of independent variables of the model.
UR - http://www.scopus.com/inward/record.url?scp=77950997940&partnerID=8YFLogxK
UR - http://www.scopus.com/inward/citedby.url?scp=77950997940&partnerID=8YFLogxK
U2 - 10.1109/IEMBS.2009.5335041
DO - 10.1109/IEMBS.2009.5335041
M3 - Conference contribution
C2 - 19965182
AN - SCOPUS:77950997940
SN - 9781424432967
T3 - Proceedings of the 31st Annual International Conference of the IEEE Engineering in Medicine and Biology Society: Engineering the Future of Biomedicine, EMBC 2009
SP - 2343
EP - 2346
BT - Proceedings of the 31st Annual International Conference of the IEEE Engineering in Medicine and Biology Society
PB - IEEE Computer Society
T2 - 31st Annual International Conference of the IEEE Engineering in Medicine and Biology Society: Engineering the Future of Biomedicine, EMBC 2009
Y2 - 2 September 2009 through 6 September 2009
ER -